Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cep120Centrosomal protein 120. (958 aa)    
Predicted Functional Partners:
rrbp1
Ribosome binding protein 1a.
    
 0.892
LOC103362310
Zgc:103692.
    
   0.888
spice1
Spindle and centriole associated protein 1.
   
 
 0.880
ENSSPAP00000024094
WW domain-containing protein.
   
 0.788
poc5
POC5 centriolar protein homolog (Chlamydomonas).
   
 
 0.786
plk4
Polo-like kinase 4 (Drosophila).
    
 0.784
cep63
Centrosomal protein 63.
   
 
 0.776
neurl4
Neuralized E3 ubiquitin protein ligase 4.
    
 
 0.766
ENSSPAP00000016534
TACC_C domain-containing protein.
    
 0.758
ENSSPAP00000018937
Uncharacterized protein.
    
 0.756
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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