STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000001983Uncharacterized protein. (84 aa)    
Predicted Functional Partners:
fis1
Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.
    
 0.909
LOC103365899
Si:dkey-13a21.4.
   
 0.877
gabarap
GABA(A) receptor-associated protein b.
   
 0.873
LOC103367659
Zgc:92606.
   
 0.867
gabarapl2
GABA(A) receptor-associated protein like 2.
   
 0.833
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.833
tbc1d17
TBC1 domain family, member 17.
     
 0.830
LOC103366613
Uncharacterized protein.
    
 0.806
LOC103359881
RAB7a, member RAS oncogene family.
    
 0.806
armc5
Armadillo repeat containing 5.
   
 0.800
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.