STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000002002Glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b. (613 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
     
  0.877
ENSSPAP00000001948
PDZ domain-containing protein.
 
      0.863
grid2
Glutamate receptor, ionotropic, delta 2.
   
 
 0.708
ENSSPAP00000002690
Uncharacterized protein.
   
 
 0.708
LOC103373434
Glutamate receptor, ionotropic, delta 1b; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
   
 
 0.708
ENSSPAP00000009910
Uncharacterized protein.
   
 
 0.708
grid1
Glutamate receptor, ionotropic, delta 1a.
   
 
 0.708
LOC103361572
Collectin sub-family member 12.
    
 
 0.659
ush1c
Usher syndrome 1C.
      
 0.650
ccdc85b
Coiled-coil domain containing 85B.
      
 0.642
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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