STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103357697t-SNARE coiled-coil homology domain-containing protein. (287 aa)    
Predicted Functional Partners:
vamp4
Vesicle-associated membrane protein 4.
    
 0.951
snap23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.923
VAMP3
Vesicle associated membrane protein 3.
    
 0.918
LOC103367795
Vesicle-associated membrane protein 2.
    
 0.903
ENSSPAP00000018630
Vesicle-associated membrane protein 1.
    
 0.903
LOC103365278
Zgc:92912.
    
 0.903
coasy
CoA synthase.
     
 0.830
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 0.824
stx4
Syntaxin 4; Belongs to the syntaxin family.
  
  
 
0.817
LOC103366523
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
  
  
 
0.812
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.