STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000002029TBC1 domain family, member 15. (336 aa)    
Predicted Functional Partners:
fis1
Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.
    
 0.949
LOC103365899
Si:dkey-13a21.4.
   
 0.932
gabarap
GABA(A) receptor-associated protein b.
   
 0.930
LOC103367659
Zgc:92606.
   
 0.926
LOC103366613
Uncharacterized protein.
    
 0.918
LOC103359881
RAB7a, member RAS oncogene family.
    
 0.918
tbc1d17
TBC1 domain family, member 17.
  
  
0.910
gabarapl2
GABA(A) receptor-associated protein like 2.
   
 0.905
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.905
armc5
Armadillo repeat containing 5.
   
 0.800
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.