STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pde6aPhosphodiesterase. (864 aa)    
Predicted Functional Partners:
LOC103360495
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.948
LOC103367853
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.943
LOC103357218
Guanylate cyclase.
   
 0.937
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a.
   
 
 0.930
LOC103354157
Phosphodiesterase 6H, cGMP-specific, cone, gamma, paralog a.
   
 
 0.926
pde6b
Phosphodiesterase.
  
 
0.911
LOC103363179
Guanylate cyclase.
   
 0.897
LOC103375188
Guanylate cyclase.
    
 0.894
LOC103368413
Guanylate cyclase.
    
 0.894
adcy6
Adenylate cyclase type 6; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.
    
 0.893
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.