STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ska2Spindle and kinetochore associated complex subunit 2. (138 aa)    
Predicted Functional Partners:
ska1
Spindle and kinetochore associated complex subunit 1.
   
 
 0.977
ska3
Spindle and kinetochore associated complex subunit 3.
   
 0.961
ENSSPAP00000018448
Uncharacterized protein.
   
 0.961
cdc20
Cell division cycle 20 homolog.
     
 0.808
bub3
BUB3 mitotic checkpoint protein.
     
 0.730
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 
 0.719
espl1
Extra spindle pole bodies like 1, separase.
     
 0.681
bub1
Uncharacterized protein.
     
 0.675
nudc
NudC nuclear distribution protein.
     
 0.674
LOC103370126
Nuclear migration protein nudC-like.
     
 0.674
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.