STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT2Synaptotagmin 2. (352 aa)    
Predicted Functional Partners:
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.878
ENSSPAP00000026797
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.878
LOC103376191
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.878
VAMP3
Vesicle associated membrane protein 3.
    
 0.872
LOC103367795
Vesicle-associated membrane protein 2.
   
 0.842
ENSSPAP00000018630
Vesicle-associated membrane protein 1.
   
 0.842
LOC103365278
Zgc:92912.
   
 0.842
syt11
Synaptotagmin XIb.
   
0.794
syt4
Synaptotagmin IV.
   
0.794
vamp4
Vesicle-associated membrane protein 4.
    
 0.744
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.