STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kif6Kinesin family member 6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (665 aa)    
Predicted Functional Partners:
kifap3
Kinesin-associated protein 3b.
   
 0.853
smyd3
SET and MYND domain containing 3.
    
  0.695
LOC103355430
SET domain and mariner transposase fusion gene.
    
  0.695
uchl5
Ubiquitin carboxyl-terminal hydrolase.
    
 0.663
bap1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.663
kif11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
0.636
zw10
Zw10 kinetochore protein.
     
 0.631
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
  0.621
rai14
Retinoic acid induced 14.
    
 0.617
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.617
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.