STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103356032WH1 domain-containing protein. (388 aa)    
Predicted Functional Partners:
actb
Uncharacterized protein.
    
 0.907
tjp1
Tight junction protein 1b; Belongs to the MAGUK family.
   
 0.886
LOC103367163
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
     
 0.868
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
 0.868
LOC103364115
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
 0.868
prkaca
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.
     
 0.868
LOC103361233
BAI1-associated protein 2a.
    
 0.795
LOC103374443
BAI1 associated protein 2.
    
 0.795
nf1
Neurofibromin 1b.
    
 0.783
nek2
NIMA-related kinase 2.
    
 0.783
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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