STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103365454Uncharacterized protein. (188 aa)    
Predicted Functional Partners:
LOC103365142
Uncharacterized protein.
   
 0.967
LOC103362657
Serine and arginine rich splicing factor 1a.
   
 0.967
SRSF3
Serine and arginine rich splicing factor 3b.
   
0.860
ENSSPAP00000023710
RRM domain-containing protein.
   
 0.860
srsf7
Serine and arginine rich splicing factor 7b.
   
0.845
ENSSPAP00000029545
Serine and arginine rich splicing factor 7a.
   
 0.845
tra2a
Transformer 2 alpha homolog.
   
 0.820
tra2b
Transformer 2 beta homolog.
   
 0.820
LOC103353788
RRM domain-containing protein.
   
 0.820
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.813
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.