STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103368873SIN3 transcription regulator family member Ab. (1298 aa)    
Predicted Functional Partners:
sap30l
Sap30-like.
    
 0.973
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.969
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.969
suds3
SDS3 homolog, SIN3A corepressor complex component.
   
 0.951
rest
RE1-silencing transcription factor.
    
 0.950
HDAC3
Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
   
 0.945
phf12
PHD finger protein 12b.
   
 
 0.931
ing1
Inhibitor of growth protein.
   
 
 0.916
LOC103353194
MRG domain-containing protein.
   
 0.909
LOC103372740
Mortality factor 4 like 1.
   
 0.909
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: medium (48%) [HD]