STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000002447Protocadherin 7b. (1054 aa)    
Predicted Functional Partners:
LOC103370573
Uncharacterized protein.
 
      0.611
fjx1
Four-jointed box kinase 1.
   
 0.611
fat2
FAT atypical cadherin 2.
   
 
0.558
fat1
FAT atypical cadherin 1a.
   
 
0.558
LOC103359554
Uncharacterized protein.
    
  0.550
LOC103362533
Junction plakoglobin a.
    
  0.550
lhfpl2
LHFPL tetraspan subfamily member 2a.
    
  0.531
LOC103366370
Uncharacterized protein.
    
  0.531
aplp2
Amyloid beta (A4) precursor-like protein 2.
    
  0.520
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.519
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.