STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nsmafNeutral sphingomyelinase (N-SMase) activation associated factor. (912 aa)    
Predicted Functional Partners:
LOC103365293
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.946
smpd2
Sphingomyelin phosphodiesterase 2b, neutral membrane (neutral sphingomyelinase).
     
 0.915
LOC103353006
Death domain-containing protein.
    
 0.885
plekhg5
Pleckstrin homology domain containing, family G (with RhoGef domain) member 5b.
    
 0.885
rack1
Receptor for activated C kinase 1.
    
0.788
rpia
Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).
     
 0.716
rbsn
Rabenosyn, RAB effector.
     
 0.688
LOC103356172
Sphingomyelin phosphodiesterase 3, neutral.
     
 0.679
ENSSPAP00000013362
Uncharacterized protein.
    
 0.632
ENSSPAP00000013393
Pleckstrin homology domain containing, family G (with RhoGef domain) member 7.
    
 0.632
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.