STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCL11BBAF chromatin remodeling complex subunit BCL11B. (765 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
  0.862
gart
Phosphoribosylglycinamide formyltransferase.
   
 
  0.644
bard1
BRCA1 associated RING domain 1.
    
 0.616
YTHDC2
YTH domain containing 2.
    
  0.579
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.575
ENSSPAP00000004797
NDK domain-containing protein.
    
 0.553
LOC103366349
Retinoblastoma binding protein 4, like.
    
 0.549
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.549
LOC103357053
RB binding protein 4, chromatin remodeling factor.
    
 0.549
kdm6b
Lysine (K)-specific demethylase 6B, a.
   
 0.539
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.