STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103372229Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1728 aa)    
Predicted Functional Partners:
LOC103370909
Tight junction protein 3; Belongs to the MAGUK family.
    
 0.701
LOC103376604
Uncharacterized protein.
    
 0.581
LOC103363874
Myosin, light chain 1, alkali; skeletal, fast.
    
 0.581
ENSSPAP00000007444
Uncharacterized protein.
    
 0.581
LOC103368462
Zgc:153867.
    
 0.581
ENSSPAP00000018745
Myosin, light polypeptide 3, skeletal muscle.
    
 0.581
myl3
Myosin, light chain 13.
    
 0.581
ENSSPAP00000027259
Uncharacterized protein.
    
 0.581
tjp1
Tight junction protein 1b; Belongs to the MAGUK family.
    
 0.580
LOC103353410
Tight junction protein 2a (zona occludens 2); Belongs to the MAGUK family.
    
 0.580
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.