Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
camk1dCalcium/calmodulin-dependent protein kinase 1Da; Belongs to the protein kinase superfamily. (437 aa)    
Predicted Functional Partners:
ENSSPAP00000011094
Calmodulin-like 4a.
    
 0.935
LOC103372325
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.911
calm1
Calmodulin 1.
    
 0.911
LOC103353515
Calmodulin.
    
 0.911
LOC103370449
Calmodulin.
    
 0.911
LOC103371366
Activating transcription factor 4a.
   
  0.844
nos1
Nitric oxide synthase; Produces nitric oxide (NO).
   
 0.825
creb3l1
BZIP domain-containing protein.
    
 0.817
creb3l4
BZIP domain-containing protein.
    
  0.815
creb3l2
cAMP responsive element binding protein 3-like 2.
    
  0.814
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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