STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdc123Cell division cycle 123 homolog (S. cerevisiae). (314 aa)    
Predicted Functional Partners:
eif2s3
Eukaryotic translation initiation factor 2, subunit 3 gamma.
    
 
 0.966
eefsec
Eukaryotic elongation factor, selenocysteine-tRNA-specific.
    
 
 0.938
eif2s2
Eukaryotic translation initiation factor 2, subunit 2 beta.
    
 
 0.900
cops5
COP9 signalosome subunit 5.
   
    0.775
LOC103366529
Zgc:56106.
   
    0.765
mrps17
Mitochondrial ribosomal protein S17.
   
    0.761
nudt5
Nudix (nucleoside diphosphate linked moiety X)-type motif 5; Belongs to the Nudix hydrolase family.
   
  
 0.679
ENSSPAP00000021755
FHA domain-containing protein.
   
 
 0.578
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
   
 
 0.571
wdfy2
WD repeat and FYVE domain containing 2.
   
  
 0.530
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.