STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000002627Uncharacterized protein. (706 aa)    
Predicted Functional Partners:
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
   0.884
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
   0.763
ENSSPAP00000021933
Uncharacterized protein.
    
   0.763
ENSSPAP00000023868
Uncharacterized protein.
    
   0.763
polr3c
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.763
ENSSPAP00000031158
Uncharacterized protein.
    
   0.763
LOC103365452
MYC binding protein.
    
   0.643
mycbp
Uncharacterized protein.
    
   0.643
ENSSPAP00000003843
Helicase-like transcription factor.
    
   0.551
ercc6l2
Excision repair cross-complementation group 6-like 2.
    
   0.551
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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