STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103360505Phospholipase A(2). (153 aa)    
Predicted Functional Partners:
pla2g12a
Phospholipase A2, group XIIA.
     
 0.915
pla2g4a
Phospholipase A2.
     
 0.915
LOC103366536
Uncharacterized protein.
     
 0.915
ptgs2
Prostaglandin-endoperoxide synthase 2b.
     
 0.905
ptdss2
Phosphatidylserine synthase 2.
     
 0.902
enpp6
Ectonucleotide pyrophosphatase/phosphodiesterase 6.
     
 0.901
LOC103374398
Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family.
     
 0.901
fads2
Fatty acid desaturase 2.
     
 0.901
LOC103362102
Arachidonate 12-lipoxygenase.
     
 0.901
LOC103361271
Cytochrome P450, family 2, subfamily U, polypeptide 1; Belongs to the cytochrome P450 family.
   
 
  0.898
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.