STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103372662Chemokine (C-C motif) receptor 6b; Belongs to the G-protein coupled receptor 1 family. (364 aa)    
Predicted Functional Partners:
LOC103363579
C-C motif chemokine.
    
 0.927
ENSSPAP00000012794
C-C motif chemokine.
    
 0.926
LOC103362822
SCY domain-containing protein.
    
 0.921
LOC103360119
C-C motif chemokine.
    
 0.913
cxcl12
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.909
LOC103364318
Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1).
    
 0.909
LOC103369144
SCY domain-containing protein.
    
 0.906
ENSSPAP00000022040
Chemokine (C-C motif) ligand 25b.
    
 0.898
ENSSPAP00000023262
Uncharacterized protein.
    
 0.877
ENSSPAP00000031224
SCY domain-containing protein.
    
 0.874
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.