STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103363842AMP-binding domain-containing protein. (608 aa)    
Predicted Functional Partners:
bbs1
Bardet-Biedl syndrome 1.
   
 0.885
bbs7
Bardet-Biedl syndrome 7.
   
 0.884
bbs9
Bardet-Biedl syndrome 9.
   
 0.884
ttc8
Tetratricopeptide repeat domain 8.
   
 0.868
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.866
LOC103368474
Sterol carrier protein 2b.
   
 
 0.866
ENSSPAP00000000771
TPR_REGION domain-containing protein.
   
 0.859
LOC103362910
Solute carrier family 27 member 2a.
  
  
 
0.818
LOC103360765
Solute carrier family 27 member 2a.
  
  
 
0.818
LOC103360766
AMP-binding domain-containing protein.
  
  
 
0.806
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.