STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103364910Si:zfos-943e10.1. (387 aa)    
Predicted Functional Partners:
LOC103363269
Myelin protein zero-like 2b.
    
 0.597
ENSSPAP00000015534
Sodium channel, voltage-gated, type II, beta.
    
 0.597
MPZL2
Myelin protein zero like 2.
    
 0.597
LOC103363268
Sodium channel, voltage-gated, type IV, beta b.
   
 0.583
LOC103376205
Sodium channel, voltage-gated, type IV, beta a.
   
 0.583
LOC103368275
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
    
  0.523
ENSSPAP00000001846
Ion_trans domain-containing protein.
    
  0.523
LOC103376591
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
    
  0.523
ENSSPAP00000002921
Ion_trans domain-containing protein.
    
  0.523
ENSSPAP00000003297
Uncharacterized protein.
    
  0.523
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.