STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rabifRAB interacting factor. (130 aa)    
Predicted Functional Partners:
LOC103375385
Uncharacterized protein.
    
 
 0.698
LOC103361823
Zgc:171927.
    
 
 0.698
rab1a
Uncharacterized protein.
    
 
 0.698
LOC103373258
ZRAB1B, member RAS oncogene family a.
    
 
 0.698
LOC103374601
RAB33B, member RAS oncogene family a.
    
 
 0.692
rab33a
RAB33A, member RAS oncogene family.
    
 
 0.692
LOC103357227
Zgc:101559.
    
 
 0.692
RAB19
RAB19, member RAS oncogene family.
    
 
 0.692
FILIP1L
Filamin A interacting protein 1 like.
    
 
 0.692
LOC103375295
Uncharacterized protein.
    
 
 0.692
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.