STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103363281G_PROTEIN_RECEP_F1_2 domain-containing protein. (285 aa)    
Predicted Functional Partners:
haus3
HAUS augmin-like complex, subunit 3.
    
 0.529
haus1
HAUS augmin-like complex, subunit 1.
    
 0.523
nts
Neurotensin.
    
  0.518
pnoc
Prepronociceptin a.
    
  0.517
haus8
Uncharacterized protein.
    
  0.513
LOC103361207
Somatostatin.
  
 
  0.510
ENSSPAP00000012851
Uncharacterized protein.
    
  0.501
LOC103369973
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.476
LOC103365868
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.476
LOC103370141
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
 0.467
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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