STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000003155FHA domain-containing protein. (75 aa)    
Predicted Functional Partners:
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.999
rad50
RAD50 homolog, double strand break repair protein.
   
 0.999
ENSSPAP00000006942
ANK_REP_REGION domain-containing protein.
    
 0.998
atm
Non-specific serine/threonine protein kinase.
    
 0.996
ENSSPAP00000002540
SAE2 domain-containing protein.
    
 0.991
bard1
BRCA1 associated RING domain 1.
    
 0.989
terf2
HTH myb-type domain-containing protein.
    
 0.980
atr
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 0.979
brca1
Uncharacterized protein.
    
 0.977
paxip1
PAX interacting (with transcription-activation domain) protein 1.
    
 0.969
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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