STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rph3aRabphilin 3A homolog (mouse), b. (550 aa)    
Predicted Functional Partners:
LOC103369709
RAB3A, member RAS oncogene family.
   
 
 0.472
LOC103373893
RAB3C, member RAS oncogene family.
   
 
 0.472
LOC103369105
RAB3B, member RAS oncogene family.
   
 
 0.472
rab3d
RAB3D, member RAS oncogene family, b.
   
 
 0.472
LOC103360788
RAB3A, member RAS oncogene family, b.
   
 
 0.472
LOC103353614
Uncharacterized protein.
   
 
 0.472
LOC103364288
RAB3C, member RAS oncogene family.
   
 
 0.472
LOC103375795
Uncharacterized protein.
    
 
 0.464
LOC103374166
RAB27B, member RAS oncogene family.
    
 
 0.464
rab27a
RAB27A, member RAS oncogene family.
    
 
 0.464
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.