STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103371700Beta-carotene oxygenase 2a. (579 aa)    
Predicted Functional Partners:
LOC103357487
LRAT domain-containing protein.
     
 0.687
pnpla4
PNPLA domain-containing protein.
     
 0.665
ENSSPAP00000006597
O-acyltransferase.
   
 
  0.655
LOC103358410
Dehydrogenase/reductase (SDR family) member 4.
     
 0.649
myo9b
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.636
LOC103374616
Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.636
LOC103364430
Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.636
LOC103353047
Myosin IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.626
ENSSPAP00000009944
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
   
 
  0.602
pnpla2
Patatin-like phospholipase domain containing 2.
     
 0.602
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.