STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zswim7Zinc finger, SWIM-type containing 7. (138 aa)    
Predicted Functional Partners:
swsap1
SWIM-type zinc finger 7 associated protein 1.
    
 
 0.920
mrpl51
Mitochondrial ribosomal protein L51.
      
 0.502
fbxo38
F-box protein 38.
      
 0.477
sap30bp
SAP30 binding protein.
      
 0.471
mrpl48
Mitochondrial ribosomal protein L48.
      
 0.418
ttc19
Tetratricopeptide repeat domain 19.
      
 0.418
ENSSPAP00000026053
Uncharacterized protein.
      
 0.416
LOC103360505
Phospholipase A(2).
    
   0.407
SPIDR
Scaffold protein involved in DNA repair.
    
   0.406
rad17
RAD17 checkpoint clamp loader component.
      
 0.404
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.