STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000003300Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family. (208 aa)    
Predicted Functional Partners:
ENSSPAP00000017677
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
 0.990
LOC103358559
Nerve growth factor receptor b.
    
 0.958
ENSSPAP00000010441
Tyrosine-protein kinase receptor.
    
 0.913
LOC103364540
Tyrosine-protein kinase receptor.
    
 0.913
ntrk1
Tyrosine-protein kinase receptor.
    
 0.880
ENSSPAP00000010137
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
  
 
0.869
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.861
ENSSPAP00000023532
Macrophage stimulating 1 receptor b.
    
  0.861
LOC103360420
Macrophage stimulating 1 receptor a.
    
  0.861
mst1r
Macrophage stimulating 1 receptor b.
    
  0.861
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.