STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103354438Si:dkey-222n6.2; Belongs to the intermediate filament family. (402 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
  0.671
bag3
BCL2 associated athanogene 3.
    
 
 0.633
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
    
 0.602
birc6
Baculoviral IAP repeat containing 6.
   
 0.591
LOC103369948
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
    
 0.582
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
    
 0.582
LOC103368079
Uncharacterized protein.
    
 0.582
trap1
TNF receptor-associated protein 1.
    
 0.582
LOC103369947
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
    
 0.582
LOC103362081
TSC complex subunit 1b.
    
 0.582
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.