STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103368405Si:ch211-38m6.7. (261 aa)    
Predicted Functional Partners:
LOC103359698
Potassium large conductance calcium-activated channel, subfamily M, beta member 2.
     
0.834
kcnma1
Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.
     
 0.739
ENSSPAP00000011463
Uncharacterized protein.
     
 0.739
LOC103369869
Ion_trans domain-containing protein.
     
 0.739
ENSSPAP00000026106
Potassium calcium-activated channel subfamily M alpha 1.
     
 0.739
ENSSPAP00000026135
BK_channel_a domain-containing protein.
     
 0.739
LOC103371723
Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a.
     
 0.688
kcnt1
Si:dkey-21e5.1.
     
 0.682
ENSSPAP00000021820
Uncharacterized protein.
     
 0.682
LOC103376247
BK_channel_a domain-containing protein.
     
 0.682
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.