STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcareUncharacterized protein. (764 aa)    
Predicted Functional Partners:
guca1b
Guanylate cyclase activator 1B.
   
  
 0.512
ENSSPAP00000011424
Uncharacterized protein.
      
 0.474
ENSSPAP00000017171
Uncharacterized protein.
  
  
 0.473
fam83h
Family with sequence similarity 83 member Hb.
  
     0.462
LOC103360446
RNA binding motif protein 6.
  
     0.451
LOC103368437
Rhodopsin.
   
  
 0.450
LOC103360080
Rhodopsin.
   
  
 0.450
LOC103360090
Rhodopsin.
   
  
 0.450
RHO
Rhodopsin.
   
  
 0.450
lrp10
Low density lipoprotein receptor-related protein 10.
  
     0.447
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.