STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103358279Si:ch211-194c3.5. (1048 aa)    
Predicted Functional Partners:
dynlt1
Dynein, light chain, Tctex-type 1.
    
 
 0.621
DYNLT3
Dynein, light chain, Tctex-type 3.
    
 
 0.620
LOC103372493
Uncharacterized protein.
    
 
 0.620
dnal4
Dynein light chain.
    
 
 0.614
dnai2
Dynein, axonemal, intermediate chain 2b.
    
 
 0.575
dynlrb1
Dynein light chain roadblock.
    
 
 0.572
DYNLRB2
Dynein light chain roadblock.
    
 
 0.572
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
    
 
 0.562
WDR63
WD repeat domain 63.
    
 
 0.555
LOC103359517
Dynein light chain.
    
 
 0.551
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.