STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000003776Uncharacterized protein. (334 aa)    
Predicted Functional Partners:
ENSSPAP00000015366
Uncharacterized protein.
 
      0.891
ENSSPAP00000015378
Uncharacterized protein.
 
      0.875
ENSSPAP00000015402
Collagen, type VI, alpha 3.
 
      0.861
C1QC
Complement C1q C chain.
  
  0.702
ENSSPAP00000027061
Uncharacterized protein.
 
      0.702
ENSSPAP00000016296
DUF4062 domain-containing protein.
    
 0.588
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.557
LOC103369091
C-type lectin domain-containing protein.
  
 
   0.553
COLEC12
Collectin subfamily member 12.
  
 
   0.542
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
 0.536
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: high (82%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.