STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103362775SH3 and cysteine rich domain 3. (332 aa)    
Predicted Functional Partners:
LOC103372010
Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.534
srl
Sarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.496
LOC103366847
RNA polymerase I and III subunit D.
    
 
 0.446
ENSSPAP00000011748
Polymerase (RNA) III (DNA directed) polypeptide B.
    
 
 0.430
ENSSPAP00000011783
Polymerase (RNA) III (DNA directed) polypeptide B.
    
 
 0.430
pmpcb
Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family.
   
 
 0.425
LOC103359883
Ubiquinol-cytochrome c reductase core protein 1.
   
 
 0.425
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.