STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnih1Cornichon family AMPA receptor auxiliary protein 1. (166 aa)    
Predicted Functional Partners:
tmed10
Transmembrane p24 trafficking protein 10.
   
 0.893
tmed2
Transmembrane p24 trafficking protein 2.
    
 0.827
LOC103367200
Uncharacterized protein.
    
 0.811
gria2
Glutamate receptor, ionotropic, AMPA 2b.
    
 0.811
LOC103375238
Lig_chan-Glu_bd domain-containing protein.
    
 0.811
LOC103363285
Uncharacterized protein.
    
 0.802
LOC103367234
Glutamate receptor, ionotropic, AMPA 3a.
    
 0.802
LOC103357241
Uncharacterized protein.
    
 0.802
gria1
Glutamate receptor, ionotropic, AMPA 1a.
    
 0.802
LOC103369875
Uncharacterized protein.
    
 0.802
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.