STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103353333Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (196 aa)    
Predicted Functional Partners:
LOC103371891
Prostaglandin D2 synthase b, tandem duplicate 1; Belongs to the calycin superfamily. Lipocalin family.
  
 
0.898
ptges
Prostaglandin E synthase.
   
 
 0.871
ptgs2
Prostaglandin-endoperoxide synthase 2b.
     
 0.857
LOC103361057
Prostaglandin E synthase 2-like.
     
 0.848
LOC103370734
GST C-terminal domain-containing protein.
     
 0.848
LOC103368333
Prostaglandin E synthase 3a (cytosolic).
     
 0.841
ptges3
Prostaglandin E synthase 3b (cytosolic).
     
 0.841
LOC103362336
Prostaglandin-endoperoxide synthase 1.
     
 0.840
LOC103357994
EGF-like domain-containing protein.
     
 0.840
prxl2b
Peroxiredoxin like 2B.
     
 0.834
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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