STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103356067Non-specific serine/threonine protein kinase. (516 aa)    
Predicted Functional Partners:
LOC103371221
Intersectin 2b.
    
 0.984
ENSSPAP00000031427
Uncharacterized protein.
    
 0.984
ENSSPAP00000031428
Uncharacterized protein.
    
 0.984
nck2
Cytoplasmic protein.
    
 0.968
nck1
Cytoplasmic protein.
    
 0.968
LOC103372297
Rho guanine nucleotide exchange factor (GEF) 7a.
    
 0.954
arhgef6
Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6.
    
 0.954
arhgef7
Rho guanine nucleotide exchange factor (GEF) 7b.
    
 0.954
LOC103372064
Cell division cycle 42.
   
 0.947
CDC42
Cell division cycle 42.
   
 0.947
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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