STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icmtProtein-S-isoprenylcysteine O-methyltransferase. (291 aa)    
Predicted Functional Partners:
zmpste24
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
   
 0.962
ENSSPAP00000008215
Ras converting CAAX endopeptidase 1a.
   
 0.935
LOC103373256
Ras converting CAAX endopeptidase 1a.
   
 0.935
oma1
OMA1 zinc metallopeptidase.
   
 0.918
LOC103375975
Uncharacterized protein.
   
 0.905
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
 0.890
rfk
Riboflavin kinase.
     
 0.890
nudt13
Nudix (nucleoside diphosphate linked moiety X)-type motif 13.
    
 0.867
LOC103368931
Si:ch211-161h7.8.
    
 0.853
LOC103356249
Rhodanese domain-containing protein.
    
 0.853
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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