STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000003977Uncharacterized protein. (175 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.988
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 0.985
igf2
Insulin-like growth factor 2b.
    
 
 0.968
gga3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.
    
 
 0.921
LOC103354887
Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.
    
 
 0.921
m6pr
Mannose-6-phosphate receptor (cation dependent).
     
 0.915
LOC103369625
Uncharacterized protein.
    
 
 0.909
LOC103355945
Uncharacterized protein.
    
 
 0.909
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 
 0.909
snx6
Sorting nexin; Involved in several stages of intracellular trafficking.
     
 0.815
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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