STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103364374Protein tyrosine phosphatase receptor type Sa. (1518 aa)    
Predicted Functional Partners:
LOC103372670
Uncharacterized protein.
   
 0.817
slitrk2
SLIT and NTRK-like family, member 2.
   
 0.775
ENSSPAP00000009012
Protein kinase domain-containing protein.
   
 0.770
LOC103367796
Tyrosine-protein kinase receptor.
   
 0.770
ntrk3
Neurotrophic tyrosine kinase, receptor, type 3b.
   
 0.770
ENSSPAP00000012470
Uncharacterized protein.
    
 0.764
ENSSPAP00000012497
TIR domain-containing protein.
    
 0.764
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.764
SLITRK1
SLIT and NTRK like family member 1.
   
 0.761
LOC103371495
Uncharacterized protein.
   
 0.729
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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