STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAND1Heart and neural crest derivatives expressed 1. (178 aa)    
Predicted Functional Partners:
ENSSPAP00000002995
Uncharacterized protein.
    
 0.619
LOC103363839
BHLH domain-containing protein.
    
 0.619
LOC103366684
Transcription factor 3a.
    
 0.619
ENSSPAP00000007193
Uncharacterized protein.
    
 0.619
ENSSPAP00000016504
Uncharacterized protein.
    
 0.619
LOC103372397
Transcription factor 12.
    
 0.619
TCF4
BHLH domain-containing protein.
    
 0.619
tcf3
Transcription factor 3b.
    
 0.619
ldb1
LIM domain binding 1a.
    
 0.579
ldb2
LIM domain binding 2a.
    
 0.579
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.