STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000004028IGv domain-containing protein. (208 aa)    
Predicted Functional Partners:
ENSSPAP00000026497
Ig-like domain-containing protein.
   
 0.987
sh2d1a
SH2 domain containing 1A duplicate b.
   
 0.895
sh2d1b
SH2 domain-containing protein.
   
 0.861
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.773
LOC103368048
Helicase ATP-binding domain-containing protein.
    
 0.743
LOC103359841
Helicase C-terminal domain-containing protein.
    
 0.743
pold1
DNA polymerase.
   
 0.726
LOC103362159
Survival of motor neuron 1, telomeric.
    
 0.717
pold4
Si:dkey-28b4.7.
    
 0.710
snrpd2
Small nuclear ribonucleoprotein Sm D2.
    
 0.694
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.