STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YAF2YY1 associated factor 2. (202 aa)    
Predicted Functional Partners:
RING1
Ring finger protein 1.
    
 0.931
rnf2
Ring finger protein 2.
    
 0.931
pcgf6
Polycomb group ring finger 6.
    
 0.895
pcgf1
Polycomb group ring finger 1.
    
 0.886
pcgf5
Polycomb group ring finger 5a.
    
 0.865
PCGF3
Polycomb group ring finger 3.
    
 0.853
LOC103371897
RAWUL domain-containing protein.
    
 0.831
LOC103375545
RING-type domain-containing protein.
    
 0.831
LOC103371470
RING-type domain-containing protein.
    
 0.831
LOC103370703
THAP-type domain-containing protein.
   
 0.826
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.