STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apba3Amyloid beta precursor protein binding family A member 3. (726 aa)    
Predicted Functional Partners:
LOC103363669
Uncharacterized protein.
   
 0.969
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.969
ENSSPAP00000029812
Guanylate kinase-like domain-containing protein.
   
 0.969
mpp1
Membrane protein, palmitoylated 1; Belongs to the MAGUK family.
   
 0.816
LOC103353854
Syntaxin binding protein 1b; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.810
stxbp2
Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.810
stxbp1
Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.810
stxbp3
Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.747
LOC103352860
Amyloid beta (A4) precursor protein b.
   
 
 0.727
APP
Amyloid beta precursor protein.
   
 
 0.727
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.