STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sall3Spalt-like transcription factor 3b. (928 aa)    
Predicted Functional Partners:
LOC103374273
POU domain protein.
   
 0.808
LOC103354555
Nanog homeobox.
   
 0.772
LOC103366349
Retinoblastoma binding protein 4, like.
    
  0.707
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
  0.707
LOC103357053
RB binding protein 4, chromatin remodeling factor.
    
  0.707
wdr73
WD repeat domain 73.
    
 0.651
gatad2b
GATA zinc finger domain containing 2B.
    
 0.643
LOC103371089
GATA zinc finger domain containing 2Ab.
    
 0.643
LOC103357610
GATA zinc finger domain containing 2A.
    
 0.643
ENSSPAP00000030721
Uncharacterized protein.
    
 0.643
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.