STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103360542ADAM metallopeptidase domain 17a. (876 aa)    
Predicted Functional Partners:
TIMP3
TIMP metallopeptidase inhibitor 3.
    
 0.938
LOC103353434
Notch receptor 1b.
    
 0.928
LOC103357999
Notch receptor 1a.
    
 0.928
LOC103358203
Notch receptor 3.
    
 0.917
LOC103354216
Notch receptor 2.
    
 0.916
LOC103371395
ADAM metallopeptidase domain 17b.
  
  
 
0.899
LOC103363835
ADAM metallopeptidase domain 10b.
     
0.801
adam10
Uncharacterized protein.
     
0.801
LOC103354503
FAT atypical cadherin 3b.
     
 0.732
fat3
FAT atypical cadherin 3a.
     
 0.732
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.