STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103356095Cyclic nucleotide gated channel subunit alpha 4. (531 aa)    
Predicted Functional Partners:
ENSSPAP00000007368
Si:dkey-44k1.5.
  
0.864
LOC103363254
Cyclic nucleotide gated channel beta 3, tandem duplicate 1.
  
0.843
LOC103363255
Cyclic nucleotide gated channel beta 3, tandem duplicate 2.
  
0.841
ENSSPAP00000011094
Calmodulin-like 4a.
     
 0.665
exoc4
Exocyst complex component 4.
     
 0.590
guca1b
Guanylate cyclase activator 1B.
   
 
 0.589
cnga2
Cyclic nucleotide gated channel alpha 2b.
  
  
0.578
LOC103361901
Cyclic nucleotide-binding domain-containing protein.
  
  
0.578
trabd
TraB domain containing.
    
   0.531
LOC103372325
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
     
 0.511
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: very high (>100%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.