STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35e1Solute carrier family 35 member E1. (379 aa)    
Predicted Functional Partners:
tgds
NAD(P)-bd_dom domain-containing protein.
   
 
 0.542
slc35g1
Solute carrier family 35 member G1.
      
 0.527
slc35c2
Solute carrier family 35 member C2.
      
0.526
slc35c1
Solute carrier family 35 member C1.
      
 0.525
slc35b2
Solute carrier family 35 member B2.
    
 
 0.514
nr2c2ap
Nuclear receptor 2C2-associated protein.
      
 0.514
cherp
Calcium homeostasis endoplasmic reticulum protein.
      
 0.509
SUGP1
SURP and G-patch domain containing 1.
      
 0.505
fbxw11
F-box and WD repeat domain containing 11b.
   
 
  0.497
ENSSPAP00000022288
Uncharacterized protein.
   
 
  0.497
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.